| ID | hsa_circ_0001865 | |||||
| Alias | hsa_circ_000998 | |||||
| Position | chr9:86292641-86293514 | |||||
| Strand | - | |||||
| Genomic length | 873 | |||||
| Spliced sequence length | 394 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_013438 | |||||
| Gene symbol | UBQLN1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 4 | 4 | 25 | 11 | WAS2 | 5 | 4 | 15 | 11 |
| Jeck2013 | Hs68_RNase | 321 | 99 | 115 | 85 | Hs68_control | 12 | 12 | 127 | 150 |
| Memczak2013 | cd_19 | 3 | 2 | 7 | 5 | |
| Rybak2015 | cerebellum | 100 | 76 | 304 | 210 | Sy5y_exp1_D0 | 3 | 3 | 47 | 38 | frontal_cortex | 399 | 142 | 390 | 238 | parietal_lobe | 132 | 82 | 238 | 225 | Sy5y_exp1_D2 | 4 | 3 | 47 | 36 | temporal_lobe | 220 | 78 | 304 | 150 | occipital_lobe | 219 | 95 | 338 | 205 | diencephalon | 99 | 76 | 324 | 268 |
| Salzman2013 | Hsmm | K562 | 28 | 24 | 331 | 375 | Mcf7 | 46 | 9 | 5 | 100 | Nhlf | Gm12878 | 42 | 25 | 142 | 245 | Sknshra | 45 | 23 | 74 | 164 | H1hesc | 12 | 7 | 142 | 354 | Bj | 45 | 21 | 51 | 174 | Nhek | 42 | 10 | 129 | 299 | Huvec | 13 | 5 | 48 | 147 | Helas3 | 30 | 17 | 56 | 192 | Hepg2 | 60 | 18 | 42 | 226 | A549 | 11 | 6 | 80 | 216 | Ag04450 | 59 | 26 | 112 | 160 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||